JOURNAL OF CLINICAL SURGERY ›› 2020, Vol. 28 ›› Issue (11): 1043-1046.doi: 10.3969/j.issn.1005-6483.2020.11.014

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Application value of nextgeneration sequencing technology in the detection of pathogenic bacteria in the joint fluid of delayed infection after knee arthroplasty

  

  • Online:2020-11-20 Published:2020-11-20

Abstract: Objective:To investigate the application value of nextgeneration sequencing technology in the detection of pathogenic bacteria in the joint fluid of delayed infection after knee arthroplasty.Methods:41 patients with joint infection after knee replacement in our hospital from February 2014 to March 2019 were selected.The bacteria in joint fluid were identified by nextgeneration sequencing technology and traditional bacterial culture.Then the detection rate of the two methods for different bacteria was calculated.Results:In the secondgeneration sequencing,31.71%,21.95%,24.39%,14.63%,17.07%,9.76% and 12.20% of the patients infected with grampositive Staphylococcus aureus,Staphylococcus epidermidis,Staphylococcus haemolyticus,human Staphylococcus,Streptococcus lactis,Streptococcus pyogenes and Streptococcus lactis were detected,moreover,19.51%,14.63%,4.88%,12.20% and 14.63% of the patients were  infected with gramnegative Pseudomonas aeruginosa,Escherichia coli,Haemophilus influenzae,Klebsiella pneumoniae and Acinetobacter baumannii.Bacterial culture found no Streptococcus lactis.No fungi were detected by the two methods.The detection rate of Staphylococcus aureus was 70.73%(13/41) by nextgeneration sequencing technology,which was higher than 12.20%(5/41) by traditional bacteria culture(P<0.05).The nextgeneration sequencing technology results showed that the average bacterial ACE index(12 834.06±317.52),Chao1 index(8 025.37±351.08),Simpson index(0.53±0.01) and Shannon index(5.06±0.11) in the samples of 41 patients were obtained.Conclusion:nextgeneration sequencing technology has a great advantage in the detection of bacteria in the joint fluid of infected patients after knee replacement,has good application prospect and value.

Key words: nextgeneration sequencing technology, knee arthroplasty, delayed infection, pathogenic bacteria

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